Compared to the other proteins in the rat kidney, what characteristics (quantity and charge) of the sphingosine kinase enzyme can you infer from its elution behavior from the DEAE column? Utilize specific observations from the graph in your answer to support your statements.

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Chapter17: Cpt Pathology And Laboratory
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Compared to the other proteins in the rat kidney, what characteristics (quantity and charge) of the sphingosine kinase enzyme can you infer from its elution behavior from the DEAE column? Utilize specific observations from the graph in your answer to support your statements.

The investigators purified the enzyme sphingosine kinase using rat kidneys as a
source of enzyme since it had been shown previously that kidneys contain a high
concentration of SPP. Kidneys were homogenized in buffer, filtered, then
fractionated by ammonium sulfate precipitation. The ammonium sulfate precipitate
was dissolved in buffer and then applied to a DEAE-cellulose (anion exchange)
column.
The investigators eluted the protein using Tris buffer at pH 7.4 with increasing
concentrations of sodium chloride (from 0.00 to 0.50 M). Fractions were collected
and assayed for sphingosine kinase in a procedure that involved the addition of
sphingosine to radioactively-labeled y³²P-ATP (that is, the y phosphate group on the
ATP contains the isotope 32P) and the subsequent quantitation of 32P in the SPP
product. The results are shown in the figure below.
Kinase activity, units
20000
15000
13519
10000
5000
0
0
it bonisido tolq
OM Nad
50
100
el bas der
0.5 M Nad
80 150
25
Fraction number
-- Kinase activity, units - Protein, mg
FU
ide 20
sahiptonigh
15
10
00000-00
5
200
Protein, mg
The dotted line represents the sodium chloride concentration of the eluting fluid.
Transcribed Image Text:The investigators purified the enzyme sphingosine kinase using rat kidneys as a source of enzyme since it had been shown previously that kidneys contain a high concentration of SPP. Kidneys were homogenized in buffer, filtered, then fractionated by ammonium sulfate precipitation. The ammonium sulfate precipitate was dissolved in buffer and then applied to a DEAE-cellulose (anion exchange) column. The investigators eluted the protein using Tris buffer at pH 7.4 with increasing concentrations of sodium chloride (from 0.00 to 0.50 M). Fractions were collected and assayed for sphingosine kinase in a procedure that involved the addition of sphingosine to radioactively-labeled y³²P-ATP (that is, the y phosphate group on the ATP contains the isotope 32P) and the subsequent quantitation of 32P in the SPP product. The results are shown in the figure below. Kinase activity, units 20000 15000 13519 10000 5000 0 0 it bonisido tolq OM Nad 50 100 el bas der 0.5 M Nad 80 150 25 Fraction number -- Kinase activity, units - Protein, mg FU ide 20 sahiptonigh 15 10 00000-00 5 200 Protein, mg The dotted line represents the sodium chloride concentration of the eluting fluid.
Task 12: Case Study: Purification of Rat Kidney Sphingosine Kinase
Objective: Becoming familiar with the purification and kinetic analysis of an enzyme
that produces a product important in cell survival.
Introduction: Sphingolipid metabolites have recently been shown to be involved in
cell viability. For example, ceramide has been shown to stimulate apoptosis, or
programmed cell death, whereas sphingosine-1-phosphate (SPP) promotes cell
survival. A number of different factors influence the levels of ceramide and SPP in
the cell, as shown in the figure below.
Anticancer drugsomme d Platelet-derived growth factor fud ni boxing
Radiation Ads of boil TNF-a.
Other growth factors
motor (4 02.0 or 0 m)
oldo
vode sus eluen oi, Joobong 792 odi ni 9° to noitsinsup roupsedre or box ITA (
Ceramide
Spingosine-1-phosphate (SPP)
HO HO
Programmed Cell Death
(Apoptosis)od orth
atnomstura tardw.yombil temat ni anistong modto odi of bors
ali no board omysho sanomzognirige ont mode solem in
Yanolo BANC or moft toivadod a
Clearly, the balance of ceramide and SPP will be one of the many factors that
influences whether a cell lives or dies. An understanding of the biochemical
processes involved in regulating these sphingolipids has important applications in
the treatment of cancer.
HO
SPP is synthesized in the cell from sphingosine and ATP as shown in the figure
below. The enzyme that catalyzes the reaction is sphingosine kinase. We will study
the purification of this enzyme.
Cell Survival
cogaidoe sdi indi bahoqui anotagiteov
sono 2000
Invivius lloo ni ushoqni bouborga asouborg tadt omvano na to elevisce oitonibl bas noitsofting of
-Obute aid to anoot od
O=P
OH
CH₂-CH- -CH
O
он aiuротот?
abodtom ispitylaus nistong bra asupurtost nollsoft istori
CH₂-CH-CHE
sphingosine
kinase
NH₂* CH
+ ATP
NH₂
CHA ADP
olgmaxs 104 yily liso mi bovlovni od of wors nood vilnoot ovad estilodator
-1-onizognidge as CH
w disob lleo berunsigong 10 juizolqoqs sisturcite of awode CH
obiumino to sloval odconsufint exotont moroftib to todmun A devive liso estomong (998) oledgeadq
(CH₂)12
1.01 sugil of awora as (CH₂)12 992 bas
todiarw zoontlini soli exoral vason si to ono od lliw 198 ban obimsiso to sonsindo virolo
basit guitsli CH₂i bovlovni 2082soong isoimodooid oda to guibretersbou nA CH₂ 10 eovil leo
-oxisognidas no slitsono liw Woonso to Inomtead siit al anoitepilqgs Instrogmi ead abigilogmulga
Transcribed Image Text:Task 12: Case Study: Purification of Rat Kidney Sphingosine Kinase Objective: Becoming familiar with the purification and kinetic analysis of an enzyme that produces a product important in cell survival. Introduction: Sphingolipid metabolites have recently been shown to be involved in cell viability. For example, ceramide has been shown to stimulate apoptosis, or programmed cell death, whereas sphingosine-1-phosphate (SPP) promotes cell survival. A number of different factors influence the levels of ceramide and SPP in the cell, as shown in the figure below. Anticancer drugsomme d Platelet-derived growth factor fud ni boxing Radiation Ads of boil TNF-a. Other growth factors motor (4 02.0 or 0 m) oldo vode sus eluen oi, Joobong 792 odi ni 9° to noitsinsup roupsedre or box ITA ( Ceramide Spingosine-1-phosphate (SPP) HO HO Programmed Cell Death (Apoptosis)od orth atnomstura tardw.yombil temat ni anistong modto odi of bors ali no board omysho sanomzognirige ont mode solem in Yanolo BANC or moft toivadod a Clearly, the balance of ceramide and SPP will be one of the many factors that influences whether a cell lives or dies. An understanding of the biochemical processes involved in regulating these sphingolipids has important applications in the treatment of cancer. HO SPP is synthesized in the cell from sphingosine and ATP as shown in the figure below. The enzyme that catalyzes the reaction is sphingosine kinase. We will study the purification of this enzyme. Cell Survival cogaidoe sdi indi bahoqui anotagiteov sono 2000 Invivius lloo ni ushoqni bouborga asouborg tadt omvano na to elevisce oitonibl bas noitsofting of -Obute aid to anoot od O=P OH CH₂-CH- -CH O он aiuротот? abodtom ispitylaus nistong bra asupurtost nollsoft istori CH₂-CH-CHE sphingosine kinase NH₂* CH + ATP NH₂ CHA ADP olgmaxs 104 yily liso mi bovlovni od of wors nood vilnoot ovad estilodator -1-onizognidge as CH w disob lleo berunsigong 10 juizolqoqs sisturcite of awode CH obiumino to sloval odconsufint exotont moroftib to todmun A devive liso estomong (998) oledgeadq (CH₂)12 1.01 sugil of awora as (CH₂)12 992 bas todiarw zoontlini soli exoral vason si to ono od lliw 198 ban obimsiso to sonsindo virolo basit guitsli CH₂i bovlovni 2082soong isoimodooid oda to guibretersbou nA CH₂ 10 eovil leo -oxisognidas no slitsono liw Woonso to Inomtead siit al anoitepilqgs Instrogmi ead abigilogmulga
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